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Updated 5 years ago
import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
import random as rd
from sklearn.decomposition import PCA
from sklearn import preprocessing
Creating a sample dataset
# Create 'gene' names as the feature variables
genes = ['gene' + str(i) for i in range(1, 101)]
# Create arrays of sample names
wt = ['wt' + str(i) for i in range(1, 6)]
ko = ['ko' + str(i) for i in range(1, 6)]
data = pd.DataFrame(columns=[*wt, *ko], index=genes)